Gene mapping is a method of finding the location of a genes and whether they are located on the same chromosome or linked.
To map genes, a certain species of fruit fly, Drosophila melanogaster is examined.
Firstly, we have to identify the phenotypic character of the Drosophila. The normal phenotype is called the wild type and will be denoted with a + while the opposite is called mutant phenotype. In this case, the character identified is the body color and the wings. Wild type Drosophila has grey bodies and normal wings while the mutant has black body and vestigial wings.
To see how linkage between genes affects the inheritance of characters, a homozygous dominant female Drosophila is crossed with a homozygous recessive male. A heterozygous F1 dihybrid will be produced. By observation, all the F1 dihybrids possess the phenotypic character of the wild type flies.
Following that, the F1 female dihybrids are crossed with the male true-breeding homozygous recessive parent fly. This method is called test cross as suggested by Mendel. From this, we can identify the genotype of the female parent and the alleles that are derived from the parents.
In this process, all the sperm will donate recessive alleles while the ova’s allele will be expressed as the phenotypic character of the offspring. Thus, by observing the phenotype of the offspring, we can tell if the genes are on the same chromosome or not.
Since chromosome is the unit of transmission during meiosis, linked genes are unable to undergo independent assortment as predicted by Mendel’s law. By using the Punnette square analysis, we observed that most flies appeared as parental phenotype. However, there are also some offspring that have traits that doesn’t match the parents (recombinants).
Theoretically, all alleles on a single chromosome should be transmitted as a unit during gamete formation. Hence, from our experimental results, we can conclude that body color and wing size are usually passed down together but only partially linked.
This is due to crossing over during meiosis where the parent’s chromatid breaks at certain points and rejoin causing a transfer in genetic information. The recombinant chromosome is passed on to gametes after subsequent occurrence of meiosis. Generally, it has been proven that the 2 genes are on the same chromosome.
Assuming that crossing over is random, the extent for this to occur is roughly equal at all points on the chromosome or proportional to the distance between the genes. Therefore, the higher the recombinant frequency, and the further apart the two genes are, the higher the chances for a cross over to occur. However, the maximum value for the recombinants is only 50 %.
Next, a linkage map is constructed based on the recombinant frequency. The distance between the genes are expressed as centimorgans where one map unit is equal to 1% recombinant frequency. Recombinant frequency is calculated by taking the total number of recombinants divided by the total offspring and then multiplied by 100. The genes are then arranged on the chromosome linearly based on their recombinant frequencies.
To conclude, gene mapping is a useful method for us to manipulate genes for better usage in the future.
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